5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA 3' interaction region | CircRNA 5' interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chr3:195997285:195997305:[-] | chr3:195997363:195997412:[-] | chr18:74698927:74698975:[-] | BSJ supported | Intron |
circRNA 5':AAGUGCAGC-GCUGUGCAGUGGUUAAAAGAAGAUGGAUGCACAGUGUU-CAGCCAAGGUCAAUGCAAGGAAGA 3' ||| | || ||| || ||| |||| ||| ||| |||||| :|||| target 3':CUCAGGACGCCGAGAC------------------CCUU--UGUCUGUUCGUCUGUU----UUACGUCUCUUCC 5' |
-30.50 | 14 | RIC-seq |
| chr3:195997285:195997319:[-] | chr3:195997390:195997412:[-] | chr18:74698926:74698972:[-] | BSJ supported | Intron |
circRNA 5':UGGGGUUCCUUCCAAAGUGCAGCGCUGU---GCAGUGGUUAAAAGAAGAU-GGAUGCACAGU 3' ||:||:| ||| || ||| :||| ||| |||: ::||||| || target 3': UCUCAGG---------ACGCCGAGACCCUUUGUCUG-----UUCGUCUGUUUUACGUCUCU 5' |
-26.40 | 9 | RIC-seq |