Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chr8:141756874:141756897:[-] chr18:74722399:74722425:[-] nonBSJ supported Intron

circRNA 5':CCUGUC-UGGAUAAUCA---UGGAGCUG 3'


            |||: ||||| || ||:|:||


target  3':AGACGUAACCUAAAUGUCCAACUUUGA 5'

 -15.40 4 RIC-seq
chr8:141756874:141756897:[-] chr18:74722399:74722426:[-] nonBSJ supported Intron

circRNA 5':CCUGUC-UGGAUAAUCA---UGGAGCUG 3'


            |||: ||||| || ||:|:||


target  3':AGACGUAACCUAAAUGUCCAACUUUGAA 5'

 -15.80 27 RIC-seq
chr8:141756878:141756897:[-] chr18:74722399:74722418:[-] nonBSJ supported Intron

circRNA 5':CCUGUC-UGGAUAAUCAUGGA 3'


            |||: ||||| || ||


target  3':AGACGUAACCUAAAUGU-CCA 5'

 -12.00 1 RIC-seq