Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865653:139865679:[+]	chr14:50053336:50053359:[+]	nonBSJ supported	Exon	circRNA 5':AGAUCUUCCAGCUAAUCCAUGUCUUCC 3' \|\|\|\|:\|\|\|\|\|\|: \|\| \|:\|\|:\|\| target 3':GCUAGGAGGUCGG--AGU--CGGAGGGC 5'	-30.10	2	RIC-seq
chrX:139865743:139865774:[+]	chr14:50053543:50053582:[+]	nonBSJ supported	Exon	circRNA 5': CUAGAUCUUCCAGUCAAU----CAGUGUCU--UC-CAGA 3' \|\|\| :\|\|\|\| \|\|\|\|\| \|\| \|\| \|\|\| target 3':CGAUACAACGGGUCCGACCUCACGUCACCGAUAAGUGUCC 5'	-14.40	1	RIC-seq
chrX:139865789:139865844:[+]	chr14:50053339:50053405:[+]	nonBSJ supported	Exon	circRNA 5':UUCCAGUCAAUC-AGUGU-CUUCCAGAA-AGAAAUCCA----------GGUCUUCCAGUCAGUCAGUGU 3' \|\|\| :\|\| \|\|:\|: \|\| \|\|\| \|\|\|\| \|\|\| \|:\|\|:\|\|\|\|\|:\| \|\|\|\|: \| target 3':UGGGCUAGCCGUAUCGCGUGAU-GUCGGGUCUUGAGGACCUGAGUUCGCUAGGAGGUCGG--AGUCGGAG 5'	-39.50	1	RIC-seq
chrX:139866341:139866385:[+]	chr14:50053329:50053369:[+]	nonBSJ supported	Exon	circRNA 5':AGGAAAUCCGUG-UCUUCCAGCAAAUCCACGUCUUCCAACAAAGCC 3' \|\|\| \|:\| \|\|:\|\|\|\|\|\| \|\| \|:\|\|:\|\| \|\|\| target 3':ACCUGAGUUCGCUAGGAGGUCGGA---GU-CGGAGGGCUCA-UCGA 5'	-33.70	1	RIC-seq
chrX:139866405:139866431:[+]	chr14:50053336:50053358:[+]	nonBSJ supported	Exon	circRNA 5':UGUCUUCCAGCCUACUUGUGUCUUCCA 3' \|\|\|:\|\|\|\|\|\|\|\| \|:\|\|:\|\| target 3':CUAGGAGGUCGGAGU----CGGAGGGC 5'	-30.80	1	RIC-seq
chrX:139866530:139866580:[+]	chr14:50053529:50053580:[+]	nonBSJ supported	Exon	circRNA 5': AUGUCUUCCAGAAAAUC---CAC--GUC-UUC-CAGAAAAUAUAUGUCUUCCAACUAA 3' \|\|\|\| :\|\|\|\| \|\| \|: \|\|\| \|\|\| :\|: \|\|\| \|\|\|\| target 3':AUACAACGGGUCCGACCUCACGUCACCGAUAAGUGUCC-------GCGCUAGGGUGAUG 5'	-14.60	2	RIC-seq