Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866098:139866143:[+] chr14:22054325:22054365:[-] nonBSJ supported Exon

circRNA 5':UGUCU--UCC--AGAAAAUCCACAUCUUCCAAUGGCCUCCAGG-UCU-UCCA 3'


            |||: || ||||||| ||||| || |||| ||| :||


target  3':CCAGGUCAGUUUUCUUUUA-----------UUACCAGAAGUCCAAGACGGGA 5'

 -23.30 1 RIC-seq
chrX:139866098:139866143:[+] chr14:22054330:22054365:[-] nonBSJ supported Exon

circRNA 5':UGUCUUCCAGAAAAUCCACAUCUUCCAAUGGCCUCCAGG-UCU-UCCA 3'


            ||| ||||||| ||||| || |||| ||| :||


target  3':UCAGUUU-UCUUUUA-----------UUACCAGAAGUCCAAGACGGGA 5'

 -23.20 1 RIC-seq