Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865456:139865490:[+] chr14:102452154:102452185:[+] nonBSJ supported CDS

circRNA 5':AUCUUCC-AGACAAUCCAUGUCU-UCCGGACAAUCCA 3'


            |||| |:|| ||||| |||: |||: |||


target  3':GAGAAACCUUUG-UAGGU-CAGGUAGGUGA---AGGA 5'

 -20.70 2 RIC-seq
chrX:139865822:139865848:[+] chr14:102510634:102510663:[+] nonBSJ supported CDS

circRNA 5':CAGGUCUUCCAGU-CAG-UCAGU--GUCUUC 3'


            ||||||| ||| ||| :|| :||||


target  3':UUCCAGAAA-UCACGUCUGGUGCCCUAGAAU 5'

 -17.90 2 RIC-seq
chrX:139865823:139865850:[+] chr14:102452154:102452180:[+] nonBSJ supported CDS

circRNA 5':AGGUCU--UCCAGUCAGUCAGUGUCUUCCA 3'


            || ||||||| :|| |||||


target  3':ACCUUUGUAGGUCAGGUAGGU---GAAGGA 5'

 -22.50 2 RIC-seq
chrX:139865952:139865990:[+] chr14:102493813:102493854:[+] nonBSJ supported CDS

circRNA 5':ACGUCUUCCAGAAAAUCCAU-GUCUUCC-----AGAAA-AUCCAUG 3'


            ||: ||||| |||||| :||| | ||| ||||||


target  3':AGCG--AGGUCC-UUAGGUCUUAGAUUGUGUAAUCUAAGUAGGUA 5'

 -24.00 1 RIC-seq
chrX:139866127:139866156:[+] chr14:102445801:102445831:[+] nonBSJ supported CDS

circRNA 5':GGCCUCCAGGUCUU-CCAGACUAUCC-AUGUC 3'


            |||| |:||| ||||||| || ||||


target  3': UGGACAGACGGAACGGUCUGAGAGAUUACAU 5'

 -24.20 1 RIC-seq
chrX:139866510:139866559:[+] chr14:102481483:102481531:[+] nonBSJ supported CDS

circRNA 5':CCACGUCUUC-C--AACCAAGCCAUGUCUUCCAGAAAAUCCACGUCUUCCAGA 3'


            |||:||:|| | ||||| :|||||:| ||| ||| |||:


target  3': GUGUAGGAGUGACUUGGUCUGGUACGGC--GUCGCGCU-GUGACACCGGUUC 5'

 -37.50 1 RIC-seq
chrX:139866616:139866644:[+] chr14:102499707:102499731:[+] nonBSJ supported CDS

circRNA 5':CUCCAGGUCUUCCAGCAUCUCCAGGGCUU 3'


            |||||||||: ||||| |||:


target  3':AAGGUCCAGAGCCUAGUAGA-----CGAGG 5'

 -25.30 2 RIC-seq
chrX:139866616:139866650:[+] chr14:102463370:102463400:[+] nonBSJ supported CDS

circRNA 5':CUCCAGGUCUUCCAGCAUCUCCAGGGCUUCC-AGCA 3'


            ||||| || ||| || |||


target  3': AGGUCAUUCG---CGACC-GGUAACGCCAUCUCGA 5'

 -15.80 2 RIC-seq
chrX:139866644:139866661:[+] chr14:102482741:102482756:[+] nonBSJ supported CDS

circRNA 5':UCCAGCAUCUGCUCGUCU 3'


            ||||| ||||||| ||


target  3':GGGUCG-AGACGAG-AGU 5'

 -23.00 1 RIC-seq
chrX:139866650:139866693:[+] chr14:102514166:102514209:[+] nonBSJ supported CDS

circRNA 5':AUC-UGCUCGUCUUCCAACAUCUCCACGUCUUCCAGCAUCU--CUGU 3'


            || | |||:||:|||||||||| |:|||| |||||| |||


target  3':CAGCAGGAGUAGGAGGUUGUAGAC--GUAGAA-GUCGUAAAAUGACU 5'

 -45.30 2 RIC-seq