Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866633:139866661:[+] chr1:144014007:144014037:[+] nonBSJ supported Exon

circRNA 5':UCUCCAGG--GCUUCCAGCAUCUG-CUC-GUCU 3'


            ||||||| || ||:: ||| :||


target  3': GAGGUCCAACGCCCUCAUCAGGUAGAGUUAG 5'

 -18.20 1 RIC-seq
chrX:139866633:139866663:[+] chr1:144014004:144014037:[+] nonBSJ supported Exon

circRNA 5':UCUCCAGG--GCUUCCAGCAUCUG-CUC-GUCUUC 3'


            ||||||| || ||:: ||| :|||:


target  3': GAGGUCCAACGCCCUCAUCAGGUAGAGUUAGAGA 5'

 -20.60 7 RIC-seq