5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865425:139865454:[+] | chr16:53269167:53269211:[+] | nonBSJ supported | CDS |
circRNA 5': CCA----GAUAAU--CC---UGAG--CUUCCAGAAAA---UCCA 3' ||| :|:|| || |||| ||||||| ||| target 3':UGGUUAACUUGUUCUCGGUCAACUCAGGAAGGUCAACUAUAAGGG 5' |
-17.20 | 4 | RIC-seq |
| chrX:139865453:139865507:[+] | chr16:53338178:53338214:[+] | nonBSJ supported | CDS |
circRNA 5': CACAUCUUCCAGACAAUCCAUGUCUUCCGGACAAUCCAUGUCUUCCAAGAAGCUC 3' ||||| ||||| ||:|| || ||| ||| || |||: target 3':AGUGUAAAAGGU---------------GGUCUAA-AGAC-CAG-AGG-UCAUCGGA 5' |
-26.00 | 1 | RIC-seq |
| chrX:139865473:139865532:[+] | chr16:53338177:53338226:[+] | nonBSJ supported | CDS |
circRNA 5':UGUCU-UCCGGACAAUC-CAUG-UCUUCCAAGAAGCUCCAAGUCUUCCAGUAAAUCAAGUCUU 3' |||| || | || ||| ||: || ||| || ||| |||||| ||:|| target 3':GCAGACAGACAA---AGUGUAAAAGGUGG-UCUAA-AGAC-CAG-AGGUCA------UCGGAC 5' |
-25.60 | 1 | RIC-seq |
| chrX:139865736:139865757:[+] | chr16:53190916:53190937:[+] | nonBSJ supported | CDS |
circRNA 5': GAAAAAUCUAGAUCUUCCAGUC 3' ||||| |||||||| target 3':ACUUUUCCUUAAU-GAAGGUCAU 5' |
-14.20 | 2 | RIC-seq |