Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866709:139866746:[+] chr3:41267154:41267184:[+] nonBSJ supported CDS

circRNA 5':CAUGUCUUCCAACAACUACCCAGUCUUCCAUCAACUGG 3'


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target  3':UUACCGUAUUUUGUUGU---GUCUU-AGG----UGACCA 5'

 -14.10 1 RIC-seq
chrX:139866709:139866747:[+] chr3:41267154:41267184:[+] nonBSJ supported CDS

circRNA 5':CAUGUCUUCCAACAACUACCCAGUCUUCCAUCAACUGGC 3'


            ||| | |||||| ||| ||| |||||


target  3':UUACCGUAUUUUGUUGU---GUCUU-AGG----UGACCA 5'

 -14.70 17 RIC-seq