Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865768:139865793:[+] chr2:220074322:220074349:[+] nonBSJ supported CDS

circRNA 5':UUCCAGAAAGAAAUCCAGGUCU--UCCA 3'


            ||| ||||||:|: |||


target  3':UAGGAAAUAAAAAAGGUCCGGGGAAGGA 5'

 -20.80 10 RIC-seq
chrX:139865769:139865793:[+] chr2:220074322:220074349:[+] nonBSJ supported CDS

circRNA 5': UCCAGAAAGAAAUCCAGGUCU--UCCA 3'


            ||| ||||||:|: |||


target  3':UAGGAAAUAAAAAAGGUCCGGGGAAGGA 5'

 -20.60 2 RIC-seq