Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865709:139865772:[+]	chr1:245027219:245027266:[-]	nonBSJ supported	CDS	circRNA 5':AGUCUUCC-AGUAAAUCUAGUUCUUCCAGAAAAAUCUAGAUCUUCCAGUCAAUCAGUGUCUUCCA 3' \|\|\|\|\|\|\| \|\| :\|\|:\|\|\| \|\|:\|\|\|\| \| \|\|\| \|\| target 3':GCAGAAGGCUCCGCCG----GAGGAGG-------------AGGAGGUAGCCCGGGCUCAGCCGGC 5'	-31.20	20	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chr1:245027219:245027266:[-]	target	392665	chr1:245027257-245027258	G>T	Developmental_and_epileptic_encephalopathy,_1\|not_provided	ClinVar
chr1:245027219:245027266:[-]	target	2009944	chr1:245027258-245027259	AGTCGGCCGCCCCCGCG>A	Developmental_and_epileptic_encephalopathy,_54	ClinVar
chr1:245027219:245027266:[-]	target	-	chr1:245027254-245027255	C>A	LAML-KR	ICGC