5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139866237:139866278:[+] | chr12:7285644:7285679:[+] | nonBSJ supported | 5UTR |
circRNA 5':AGUCCACGUCUUCCAACAAAGCCAUGUCUUCCAGACUAU-CCA 3' ||| || |||| :| |||:|:| ||| || target 3':ACAGUA--AG-AGGUAC---UGCUACGGGACCA-UGAGACGGA 5' |
-16.30 | 2 | RIC-seq |
| chrX:139866614:139866657:[+] | chr12:7288840:7288884:[+] | nonBSJ supported | CDS |
circRNA 5':AUC-UC-CAGGUCUUCCA-GCAUCU-CCAGGGCUUCCAGCAUCUGCUC 3' || || |||||| |||| || |||||| ||| ||| target 3':AAGUAGUGUCCAG-AGGUCCGCCUAUGGUCCCUUGUUUCGGUU-CGA 5' |
-36.50 | 23 | RIC-seq |
| chrX:139866614:139866658:[+] | chr12:7288838:7288884:[+] | nonBSJ supported | CDS |
circRNA 5':AUC-UC-CAGGUCUUCCA-GCAUCU-CCAGGGCUUCCAGCAUCUGCUCG 3' || || |||||| |||| || |||||| ||| |||| target 3':AAGUAGUGUCCAG-AGGUCCGCCUAUGGUCCCUUGUUUCGGUU-CGAGG 5' |
-40.90 | 1 | RIC-seq |
| chrX:139866620:139866641:[+] | chr12:7288865:7288887:[+] | nonBSJ supported | CDS |
circRNA 5':AGG-UCUUC-CAGCAUCUCCAGGG 3' || || || ||| |||||||| target 3':ACCAAGUAGUGUCC-AGAGGUCCG 5' |
-22.90 | 1 | RIC-seq |