Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865868:139865881:[+] chr17:62224956:62224969:[-] nonBSJ supported 3UTR

circRNA 5':CACCAAAU-CCAGGU 3'


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target  3':CUGGUCACUGGUCC 5'

 -12.20 2 RIC-seq
chrX:139865868:139865883:[+] chr17:62224956:62224972:[-] nonBSJ supported 3UTR

circRNA 5':CACCAAAU-CCAGGUCU 3'


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target  3':CUGGUCACUGGUCCUGU 5'

 -13.40 15 RIC-seq