Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865743:139865758:[+] chr5:145529141:145529161:[-] nonBSJ supported Intron

circRNA 5':CUAGAUCUUC-----CAGUCA 3'


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target  3':UGUCGAGAAGAUUUUGUCGGA 5'

 -11.60 1 RIC-seq
chrX:139865743:139865768:[+] chr5:145529104:145529131:[-] nonBSJ supported Intron

circRNA 5':CUAGAUCUUCCAGUCAAU--CAGUGUCU 3'


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target  3':CAUCUUGAGUGACGAUUAUUGUGACAGU 5'

 -12.40 1 RIC-seq