Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866620:139866645:[+] chr19:438798:438828:[-] nonBSJ supported CDS

circRNA 5':AGGUCU--UCCAGCAU---CUCCAGGGCUUC 3'


            | ||| :|||| |: | |||||||:|


target  3':ACGAGAACGGGUCCUGCCUGCGGUCCCGGAA 5'

 -25.40 18 RIC-seq
chrX:139866620:139866657:[+] chr19:438798:438839:[-] nonBSJ supported CDS

circRNA 5':AGGUCU--UCCAGCAU---CUCCAGGGCUUCCAGCAUCUGCUC 3'


            | ||| :|||| |: | |||||||:| ||:


target  3':ACGAGAACGGGUCCUGCCUGCGGUCCCGGAACAACCCC-CGGA 5'

 -26.50 5 RIC-seq