Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139866782:139866807:[+]	chr19:6440879:6440913:[-]	nonBSJ supported	3UTR	circRNA 5':UGAUCU----UCUGAC--AUUCAGGUCUU---CCA 3' \|\|:\|: :\|\|\| \|\|\|\|\|\|:\|\| \|\| target 3':CCUGGGCCGCGGACCUUCUAAGUCUAGUCUUUGGC 5'	-17.30	21	RIC-seq
chrX:139866798:139866815:[+]	chr19:6440878:6440893:[-]	nonBSJ supported	3UTR	circRNA 5':AGGUCUUCCAGUGUCUGC 3' \|\| :\|\| \|:\|:\|\|\| target 3':CCCU--GGGCCGCGGACC 5'	-14.30	1	RIC-seq

Variants map to interaction

Interaction region	CircRNA/target	Mutation ID	Position	Variant	Associated trait	Resource
chrX:139866782:139866807:[+]	circRNA	-	chrX:139866793-139866794	C>T	LICA-CN	ICGC