Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866619:139866661:[+] chr3:113442816:113442854:[-] nonBSJ supported CDS

circRNA 5':CAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUGCUCGUCU 3'


            || || |||:| |||||| :| ||| :|| |||


target  3':AUCGAGC-GGUUG--GAGGUCGUGUAGGAACAUCUUGAACAG 5'

 -32.50 2 RIC-seq
chrX:139866619:139866661:[+] chr3:113442816:113442855:[-] nonBSJ supported CDS

circRNA 5':CAGGUCUUCCAGCAUCUCCAGGGCUUCCAGCAUCUGCUCGUCU 3'


            || || |||:| |||||| :| ||| :|| |||


target  3':AUCGAGC-GGUUG--GAGGUCGUGUAGGAACAUCUUGAACAGU 5'

 -32.50 16 RIC-seq