5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865988:139866017:[+] | chr9:74866293:74866323:[+] | nonBSJ supported | Intron |
circRNA 5':AUGUCUUCCAGUAA-CCUCCC-AGUCUUCCAG 3' ||:|||||||: ||| ||: :|||| target 3': ACGGAAGGUCGAACGGAAAUUUCGAGAGGUA 5' |
-26.60 | 2 | RIC-seq |
| chrX:139865988:139866017:[+] | chr9:74866293:74866324:[+] | nonBSJ supported | Intron |
circRNA 5':AUGUCUUCCAGUAA-CCUCCC-AGUCUUCCAG 3' ||:|||||||: ||| ||: :|||| target 3':CACGGAAGGUCGAACGGAAAUUUCGAGAGGUA 5' |
-26.90 | 10 | RIC-seq |
| chrX:139865988:139866017:[+] | chr9:74866294:74866323:[+] | nonBSJ supported | Intron |
circRNA 5':AUGUCUUCCAGUAA-CCUCCC-AGUCUUCCAG 3' ||:|||||||: ||| ||: :|||| target 3': ACGGAAGGUCGAACGGAAAUUUCGAGAGGU 5' |
-26.60 | 1 | RIC-seq |
| chrX:139865988:139866017:[+] | chr9:74866294:74866324:[+] | nonBSJ supported | Intron |
circRNA 5':AUGUCUUCCAGUAA-CCUCCC-AGUCUUCCAG 3' ||:|||||||: ||| ||: :|||| target 3':CACGGAAGGUCGAACGGAAAUUUCGAGAGGU 5' |
-26.90 | 1 | RIC-seq |
| chrX:139865994:139866017:[+] | chr9:74866293:74866317:[+] | nonBSJ supported | Intron |
circRNA 5':UCCAGUAA-CCUCCC-AGUCUUCCAG 3' ||||: ||| ||: :|||| target 3': GGUCGAACGGAAAUUUCGAGAGGUA 5' |
-15.40 | 1 | RIC-seq |
| chrX:139866675:139866700:[+] | chr9:74866294:74866323:[+] | nonBSJ supported | Intron |
circRNA 5':CGUCUUCCAGCA--UCUCUGUG--UCUUCC 3' |:|||||||| :|| |: |||:| target 3':ACGGAAGGUCGAACGGAAAUUUCGAGAGGU 5' |
-22.50 | 1 | RIC-seq |
| chrX:139866675:139866701:[+] | chr9:74866293:74866323:[+] | nonBSJ supported | Intron |
circRNA 5':CGUCUUCCAGCAUCUCUGU---GUCUUCCA 3' |:|||||||| :|| |: :|||| target 3':ACGGAAGGUCGAACGGAAAUUUCGAGAGGUA 5' |
-24.40 | 20 | RIC-seq |
| chrX:139866675:139866701:[+] | chr9:74866294:74866323:[+] | nonBSJ supported | Intron |
circRNA 5':CGUCUUCCAGCAUCUCUGU---GUCUUCCA 3' |:|||||||| :|| |: :|||| target 3':ACGGAAGGUCGAACGGAAAUUUCGAGAGGU 5' |
-24.10 | 1 | RIC-seq |