Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865966:139866013:[+] chr1:145439817:145439876:[+] nonBSJ supported CDS

circRNA 5':AUCCAUGUCU-----------------------UCCAGAAAAUCCAUGUCUUCCAGUAACCUCCCAGUCUU 3'


            || ||||| || |||||| || || :||||| |||||


target  3':AAGAAACAGAGAACUCAACCGACCGAGCCCGCCAGUUCUUUUCGGA--AGUGGGUCA--------UCAGA 5'

 -21.40 2 RIC-seq