Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866122:139866143:[+] chr11:67942603:67942627:[-] nonBSJ supported 5UTR

circRNA 5':CCAAUGGCCUCCA--GG-UCUUCCA 3'


            |||| :| ||| :| ||||||


target  3':AGUUAAUGAAGGAAAUCAAGAAGGA 5'

 -16.70 1 RIC-seq
chrX:139865389:139865430:[+] chr11:67947077:67947116:[-] nonBSJ supported Exon

circRNA 5':CAGC-GACUUCAAGUCUUCCAAUAAUCUCAAGGUCUUCCAGAU 3'


            ||| |||| || |||| ||||


target  3':CUCGACUGACC-UCCCCACCCCUUGUCC-UUCCCCUU-GUCUU 5'

 -10.10 2 RIC-seq