Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866335:139866363:[+] chr10:104019825:104019856:[+] nonBSJ supported CDS

circRNA 5':UCUUCCA--GGAAAUCCGUGUCUUC-CAGCAA 3'


            |:||| :|| ||| || |||||


target  3':UGGAGGAAAUCUACUGGCUUUGAUACGUCGUC 5'

 -18.60 21 RIC-seq
chrX:139866337:139866363:[+] chr10:104019825:104019854:[+] nonBSJ supported CDS

circRNA 5':UUCCA--GGAAAUCCGUGUCUUC-CAGCAA 3'


            ||| :|| ||| || |||||


target  3':GAGGAAAUCUACUGGCUUUGAUACGUCGUC 5'

 -15.70 1 RIC-seq