Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865820:139865848:[+] chr16:23581877:23581900:[+] nonBSJ supported CDS

circRNA 5':UCCAGGUCUUCCAGUCAGUCAGUGUCUUC 3'


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target  3':CGGUAAAG-GGGUC-GU--GUCACAGAA 5'

 -24.60 2 RIC-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr16:23581877:23581900:[+] target - chr16:23581892-23581893 G>T LICA-CN ICGC