5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| chrX:139865468:139865522:[+] | chrX:53573433:53573502:[-] | nonBSJ supported | CDS |
circRNA 5':AUCCAU--------------------GUCUUCCGGACAAUCCAU-GUCUUCCAA-GA-AGCUCCAAGUCUUCCAGUAA 3' ||||| || |:|||| :||| |||::|| || |||| | ||| |||| target 3':GAGGUAAGUCAUCGUCGAACUCUUGUCACAGGGCCCA--GGGUCUCAGGGGGGCCCUCUCGACG-UCA-----UCAUG 5' |
-31.10 | 1 | RIC-seq |
| chrX:139865528:139865590:[+] | chrX:53615402:53615464:[-] | nonBSJ supported | CDS |
circRNA 5': GUCUUCCAGCAAAUCCAGUCUUCCAGCAAUUACUGGUCUUCCACCAAAUCCAGAUCUUCCAGG 3' |:| || :| ||||| ||| || ||| || ||| target 3':CCGGUAGACUGAAUAGGUGAGACUGUGCCAAAAACACAGUGAACAACAGUCCCCUUCUC-GUCG 5' |
-19.50 | 1 | RIC-seq |
| chrX:139865552:139865591:[+] | chrX:53615394:53615430:[-] | nonBSJ supported | CDS |
circRNA 5':AGCAAUUACUGGUCUUCCACCAAAUCCAGAUCUUCCAGGA 3' ||| |||:| || ||||| ||| || | target 3':CCGUCAC--ACCGGUAGACUGAAUAGGUG-AGACUGUGCC 5' |
-19.00 | 1 | RIC-seq |
| chrX:139866221:139866259:[+] | chrX:53616734:53616770:[-] | nonBSJ supported | CDS |
circRNA 5':UCCGUGUCUUCCAGCAAG--UCCACGUCUUCCAACAAAGCC 3' ||| |: |||| ||| :||||| |||| target 3':GGGCUCGAAAGGCAAGGAGAAGGA--GGAAGGCCG-UUCG 5' |
-24.10 | 3 | RIC-seq |
| chrX:139866331:139866377:[+] | chrX:53616710:53616746:[-] | nonBSJ supported | CDS |
circRNA 5':CAGG-UCUUCCAGGAAAUCCGUGUCUUCCAGCAAAUCCACGU-C-UUCCA 3' || |||||| ||:||| || ||| || | |||| target 3':AUCGGAGAAGG------------AGGAGGACGAAAAGG-GCUCGAAAGGC 5' |
-25.00 | 2 | RIC-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chrX:53573433:53573502:[-] | target | - | chrX:53573466-53573467 | G>T | LICA-CN | ICGC |