Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865427:139865454:[+] chr5:149934507:149934535:[+] nonBSJ supported 3UTR

circRNA 5': AGAUAAUCCUGAGCUUCCAGAAAA----UCCA 3'


            |||:|| ||| :|||||||| |||


target  3':UUCUGUUCGGA----GAGGUCUUUCAUAAAGGA 5'

 -19.00 2 RIC-seq
chrX:139866510:139866539:[+] chr5:149907831:149907858:[+] nonBSJ supported CDS

circRNA 5':CCACGUCUUCCAACCAAGCCAUGUCUU--CCA 3'


            ||||||:||| ||| ||||: ||


target  3':AGUGCAGGAGG-UGGAA--GUACGCACACGG 5'

 -26.30 2 RIC-seq