5'UTR
CDS
3'UTR
Exon
circRNA binding site
| CircRNA 3' interaction region | CircRNA 5' interaction region | Target interaction region | Interaction type | Target element | RNA duplex | MFE (kcal/mol) | Reads | Methods |
| - | chr2:171906651:171906672:[-] | chr11:65210489:65210509:[+] | BSJ supported | Exon |
circRNA 5':CUCAGACGGCAAAUAGAUGAAC 3' ||| ||| ||| :||||| target 3':UAGUAUGCAA-UUAGUUACUUC 5' |
-9.40 | 1 | KARR-seq |
| chr2:171902683:171902717:[-] | chr2:171906662:171906684:[-] | chr11:65210447:65210501:[+] | BSJ supported | Exon |
circRNA 5':AUGAUCCCUUUGUUAGACCAAAUUUACCACAACUGGCUAACUGU-GAUCUCAGAC-GGCA 3' |:||| || ||| ||||| |: || || || ||| target 3':AAUUAGUU--ACU-UCUUUCCCUC--GGUGUGUAAAUUUUUUCGUCUUUAGCAUGUCCGG 5' |
-16.10 | 1 | KARR-seq |
| Interaction region | CircRNA/target | Mutation ID | Position | Variant | Associated trait | Resource |
| chr11:65210447:65210501:[+] | target | - | chr11:65210450-65210464 | CTGTACGATTTCTG>- | PACA-CA | ICGC |