Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139866137:139866148:[+] chrX:71677057:71677069:[-] nonBSJ supported Intron

circRNA 5':UCUUCCA-GACUA 3'


            ||||| :||:


target  3':UGAAGGAGUUGGA 5'

 -9.50 2 KARR-seq
chrX:139865998:139866033:[+] chrX:71693796:71693836:[-] nonBSJ supported 3UTR

circRNA 5': GUAACCUCCCAGUCUU-CCAGA--AAAUCCAC-GUC-UUCC 3'


            |:| |||||: |||:| ||| |||| |: |||


target  3':ACGUGAAAU-GUCAGGUCGGUUUGAUUUUGGUGACGAUAAGA 5'

 -20.50 1 KARR-seq
chrX:139866263:139866274:[+] chrX:71677057:71677069:[-] nonBSJ supported Intron

circRNA 5':UCUUCCA-GACUA 3'


            ||||| :||:


target  3':UGAAGGAGUUGGA 5'

 -9.50 2 KARR-seq