Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865479:139865538:[+]	chr6:18255606:18255650:[-]	nonBSJ supported	Intron	circRNA 5':CCGGACAAUCCAUGUCUUCCAAGAAGCUCCAAGUCUUCCAGUAAAUCAAGUCUUCCAGCA 3' \|:\| \|\|: :\|\|\|\|\| \|\|\|\| \|\|:\|\|\| \|:\| \|\|\| \|\|:\| \|\|\|\| target 3':UGUCCAAC--GUGGGGAAGG------GAGG-UCGGAA---CGUGGAGU--AGGA-GUCGG 5'	-34.10	1	KARR-seq
chrX:139865513:139865538:[+]	chr6:18255622:18255650:[-]	nonBSJ supported	Intron	circRNA 5': CUUCCAGUAA---AUCAAGUCUUCCAGCA 3' \|:\|\|\|\|\|: \|:\| :\|\|:\| \|\|\|\| target 3':GGGAGGUCGGAACGUGGAGUAGGA-GUCGG 5'	-25.20	1	KARR-seq