Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chrX:139865802:139865850:[+] chr21:37444975:37445005:[+] nonBSJ supported CDS

circRNA 5':GUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAGUCAGUGUCUUCCA 3'


            ||||::| ||:|| ||| ||||| ||||


target  3':AACAGGGGAA--------------AGGAGACGAGUGAGUCA---AAGG 5'

 -24.90 3 KARR-seq
chrX:139865825:139865850:[+] chr21:37444975:37444995:[+] nonBSJ supported CDS

circRNA 5':GUCUUCCAGUCAGUCAGUGUCUUCCA 3'


            ||:|| ||| ||||| ||||


target  3': AGGAGACGAGUGAGUCA---AAGG 5'

 -19.50 2 KARR-seq