Gene structure and interaction sites

 5'UTR

 CDS

 3'UTR

 Exon

 circRNA binding site

Detailed information
CircRNA interaction region Target interaction region Interaction type Target element RNA duplex MFE (kcal/mol) Reads Methods
chr8:68049754:68049791:[+] chr11:65192523:65192555:[+] nonBSJ supported Exon

circRNA 5': UUAGAAGCUGAAAUGAGAACAUAUAAUCCCUGGGGAAA 3'


            |:| :||:|| || |||::|:|||


target  3':GGGUGCGUGAUUUAAGGG--GUUUC---GGGGUCUCUU 5'

 -16.00 3 KARR-seq
chr8:68049804:68049829:[+] chr11:65202647:65202677:[+] nonBSJ supported Exon

circRNA 5':UGCUCC----UCUCAGGGA-UGCAAAAGGAA 3'


            ||||| :|:|| |:||| || |


target  3':GUGAGGUGUCGGGGUAGGUAAUGUUAUCGUG 5'

 -14.60 6 KARR-seq
Variants map to interaction
Interaction region CircRNA/target Mutation ID Position Variant Associated trait Resource
chr8:68049754:68049791:[+] circRNA 3661567 chr8:68049788-68049789 GA>G Joubert_syndrome_21 ClinVar