Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865346:139865403:[+]	chr21:45169974:45170027:[+]	nonBSJ supported	Intron	circRNA 5': CG-AUGG--CACCUGUG--UCAA-GGUCUUCCAACAACUCCGGGUCUUCCAGCGA-CUUCAAGUC 3' \|\| \|\|\|\| \|\|\|\|::\|\| \|\|\| \|\|:\|\| \|\|:\|\| \|\| \| \|::\|\|\|\|\| target 3':UGCGUACCCGGUGGGUACCGAGUCCCCGGA-----------GCUCACUCUA-CGGUGGGGGUUCAA 5'	-35.30	1	KARR-seq
chrX:139865346:139865405:[+]	chr21:45170080:45170135:[+]	nonBSJ supported	Intron	circRNA 5':CGAUGGCACCUGU-GUCAAGGUCUUCCAACAACUCCGGGUCU---UC-CAGCGACUUCAAGUCUU 3' \|\|\|\|\| \|\| \|: \|:\|\| \|\|:\|::\| \|\|\| :\|\|:\|: :\| \|\|\|\|\| \| \|\|\|\|: target 3':ACUACC-UGU-CGUCGGUGCCGGGGG-----UGAAUUCCGGGUACGGUGUCGC-GUCC--CAGAGU 5'	-42.20	1	KARR-seq