Gene structure and interaction sites

5'UTR

CDS

3'UTR

Exon

circRNA binding site

Detailed information

CircRNA interaction region	Target interaction region	Interaction type	Target element	RNA duplex	MFE (kcal/mol)	Reads	Methods
chrX:139865819:139865868:[+]	chr10:120810122:120810169:[-]	nonBSJ supported	CDS	circRNA 5':AUCCAGGUCUUCCAGUCAGUCAGUGUCUUCCAGAAAAAUCUACG-UCUUCC 3' \|\|\| \| \|\|\|\|\|\|\|:\|\| \| :\|\|:\|\|\| \|\| \|\|\|\|\| target 3':AAGG-CAAGAAGGUUAG-CUAAUACGGAAAGAAGACGAUUA-GCGAGAAGU 5'	-28.50	4	KARR-seq
chrX:139865801:139865849:[+]	chr10:120810141:120810169:[-]	nonBSJ supported	CDS	circRNA 5':AGUGUCUUCCAGAAAGAAAUCCAGGUCUUCCAGUCAGUCAGUGUCUUCC 3' \|\|\|:\|\|\| \|\|\|\|\| \|: \|:\|\| \|: \|\|\|\|\| target 3':AUACGGAA-----------------AGAAGA-CGAUUAG-CG-AGAAGU 5'	-17.40	3	KARR-seq
chrX:139865817:139865831:[+]	chr10:120810157:120810169:[-]	nonBSJ supported	CDS	circRNA 5':AAAUCCAGGUCUUCC 3' \|\|\|\| \| \|\|\|\|\| target 3':AUUAG--CGAGAAGU 5'	-8.00	1	KARR-seq